Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_007652.1 Length=14071 Score E Sequences producing significant alignments: (Bits) Value seq243501 80.6 2e-11 >seq243501 Length=10469 Score = 80.6 bits (88), Expect = 2e-11 Identities = 219/319 (69%), Gaps = 21/319 (7%) Strand=Plus/Plus Query 6603 ACCACAACACAAGCAACTGCA-CAACTGACAACACCAACAGCCCCAAAAGCAAGCATAGC 6661 || |||||| | |||| || |||| |||||| ||||| | ||| ||||| | ||| Sbjct 1115 ACAACAACAACACCAACACCAACAACA-ACAACAACAACAACAGCAACAGCAACAACAGC 1173 Query 6662 ACCCAAGAACAGACAGGCAACAACCaaaaaaaCCGAAACGGGCACCacaacaacaagcag 6721 | | || |||| ||| ||||||| | || ||| ||| | || |||||||||| | Sbjct 1174 AAC-AACAACA-ACAA-CAACAACAAGAACAACAACAACAGCAACAACAACAACAACAAC 1230 Query 6722 agcaaagaaaaccaacaacc-caacagagacagcaacaacaactctcaaagcaacaacag 6780 | ||| ||| | ||||||| ||||| ||| |||||||||| | |||||||||| Sbjct 1231 AACAA-GAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAGCAACAACAC 1289 Query 6781 aaacag-----gcaagggcaa--agaGGGGC--CAACA-CAGCACACAATCAAAG-AACA 6829 ||||| |||| ||| | || || ||||| || || |||| | || |||| Sbjct 1290 CAACAGCAGGAGCAACAACAACAACAGCAGCAACAACAACAACA-ACAACAACAGCAACA 1348 Query 6830 GCCCGAA--ACAACAGCAGGAGAAACAACTACCCCACAGTCAAGAAGAACAACCAGCAGG 6887 || || ||||||||||||| |||||| || || ||| || |||||| | | Sbjct 1349 GCAAAAACAACAACAGCAGGAGCAACAACAACAACAACAACAACAACAACAACAACAACA 1408 Query 6888 CCAGCCCCAACAACAAAAA 6906 || | ||||||||| || Sbjct 1409 ACAACAACAACAACAACAA 1427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 44649575501982