Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq81 86.0 4e-13 seq58 86.0 4e-13 seq10 86.0 4e-13 >seq81 Length=1043490 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || | ||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1031582 GCCCGCGTCGGCCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGGGGTTTGTTGCAC 1031641 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1031642 GTATTAGCTCT 1031652 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || | ||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1040383 GCCCGCGTCGGCCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGGGGTTTGTTGCAC 1040442 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1040443 GTATTAGCTCT 1040453 >seq58 Length=1363798 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || | ||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1335705 GCCCGCGTCGGCCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGGGGTTTGTTGCAC 1335646 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1335645 GTATTAGCTCT 1335635 >seq10 Length=3646474 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || | ||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 3329000 GCCCGCGTCGGCCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGGGGTTTGTTGCAC 3328941 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 3328940 GTATTAGCTCT 3328930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28406113663488