Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq3359 87.8 7e-14 >seq3359 Length=14268 Score = 87.8 bits (96), Expect = 7e-14 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||| | |||||| |||| |||| || | | |||| | || | |||||||| | Sbjct 2739 TTTATGATGCGATGCAATTTGTTGTACCTGATGTTCATACAATTTGTATGGGATTAGCTG 2798 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCA 114 |||||||||| ||| |||| | |||||||||||||| |||||| ||||| Sbjct 2799 CTTCAATGGGCTCTTTTATTTTAACAGGAGGAGAAATTACTAAACGTATAGCA 2851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045538180160