Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq1990 87.8 7e-14 >seq1990 Length=122890 Score = 87.8 bits (96), Expect = 7e-14 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||| |||||||| |||| | || || | | |||| | || | |||||||| | Sbjct 12508 TTTATGATGCTATGCAATTTGTAGTTCCTGATGTTCATACAATTTGTATGGGATTAGCTG 12567 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| | | || || |||||||| |||||| |||| || || Sbjct 12568 CTTCAATGGGATCTTTTATTTTAGCTGGGGGTGAAATTACTAAACGTATAGCGTTACC 12625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045985443200